HomeAll softwareProductsNew ProductsServicesManagement teamCorporate ProfileContact

Test online

Gene finding
Gene finding with similarity
Gene finding in Bacteria
Gene finding in Viruses
Next Generation
Gene search
Gene explorer
Promoter
Protein location
RNA structure
Protein structure
PSSFinder  prediction of protein secondary structure using Markov chains.
SSPRED  program of secondary structure prediction
SSPAL  Nearest-neighbor with local alignments SS prediction
NNSSP  Nearest-neighbor SS prediction
SSP  Segment-oriented SS prediction
SSENVID  Protein secondary structure and environment assignment from atomic coordinates
PDISORDER  Protein Disorder Prediction
GETATOMS  Atomic coordinates using homologous protein
3D-comp  Structure Alignment to Superposition
AbIni3D  Ab inition folding
MDynSB  Program MDynSB is designed to perform multiple tasks with protein structure
HMod3DMM  Energy minimization program by molecular mechanic
CYS_REC   Prediction of SS-bonding States of Cysteines in Protein Sequences
3D-Match  Comparing 3D structures of two proteins
3D-MatchDB  Comparing 3D structure with 3D-Database
3DmodelFit  program for comparison protein 3D model and its original structure
3d-explorer
SeqMan
Multiple alignment
Analysis of expression data
Plant promoter database
Search and map repeats
Extracting known SNPs

 

 

Protein secondary structure

SSPRED

SSPRED - program of secondary structure prediction
Neural nets based on profile of psiBLAST comparison of the query sequence with NR database.

Paste protein sequence here:

Alternatively, load a file:
Local file name:

[Help] 
[Example]

Return to page with other programs of group: Protein structure

Your use of Softberry programs signifies that you accept Terms of Use

Last modification date: 17 Sep 2008

© 2021 www.softberry.com