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SpliceDB: canonical and non-canonical splice site sequences in mammalian genesBurset M., Seledtsov I., Solovyev V. (Nucl.Acids Res.,2000,28,4364-4375; Nucl. Acids Res.,2001,29,255-259) Complete mammals (43337 pairs) database
SpliceDB
Mammalian frequency matrices for GT-AG pairs
34.08 60.36 9.14 0.00 0.00 52.57 71.26 7.08 15.98 36.24 12.90 3.27 0.00 0.00 2.82 7.56 5.50 16.46 18.31 12.48 80.34 100.00 0.00 41.94 11.76 81.35 20.90 11.38 14.25 7.24 0.00 100.00 2.55 9.29 5.88 46.16 acceptor site 9.00 8.44 7.51 6.82 7.63 7.98 9.66 9.23 7.57 7.69 23.76 4.21 100.00 0.00 23.86 31.03 31.04 30.69 29.32 32.60 33.00 37.26 38.56 41.02 35.28 30.92 70.82 0.00 0.00 13.81 12.50 11.52 10.56 10.35 11.05 11.32 11.25 8.52 6.56 6.37 21.14 0.32 0.00 100.00 51.97 42.36 44.04 47.04 49.43 47.05 46.28 40.81 42.89 44.54 50.50 24.09 24.61 0.00 0.00 10.37 Mammalian frequency matrices for GC-AG pairs
40.48 88.89 1.59 0.00 0.00 87.30 84.13 1.59 7.94 42.06 0.79 0.79 0.00 100.00 0.00 3.17 0.79 11.90 15.87 1.59 97.62 100.00 0.00 12.70 6.35 96.83 9.52 1.59 8.73 0.00 0.00 0.00 0.00 6.35 0.79 70.63 acceptor site 11.11 12.70 3.17 4.76 12.70 8.73 16.67 16.67 12.70 9.52 26.19 6.35 100.00 0.00 21.43 36.51 30.95 19.05 23.02 34.92 39.68 34.92 40.48 40.48 36.51 33.33 68.25 0.00 0.00 7.94 9.52 10.32 15.08 12.70 8.73 9.52 16.67 4.76 2.38 6.35 13.49 0.00 0.00 100.00 62.70 38.89 41.27 58.73 55.56 42.06 40.48 30.95 37.30 44.44 47.62 26.98 25.40 0.00 0.00 7.94 |
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