NsiteH / search for functional motifs conserved in a pair of orthologous sequences (for RE Sets derived from ooTFD, Regsite AN DB and RegsitePL DB)
Paste your nucleotide sequence in here: >gi|19674|emb|X12512.1| Nicotiana plumbaginifolia Cab-E gene 5'-flanking region CATCCTTACTAACGGTAAATAACTTAGAAGTTATTGTATACGTATGATCG AGCTGTTGGACTTGTAGTATCAAACTTTCAATGACGCATCAAAATTAATTATGGTAGCTTCGCGTTGGGA CACTTGTACATGCATTAACTTGATTTCAATTTCTTTTTTAAAAATATTTGTCTATTGTCAATTTACCACT CGTACTTGAAGTGGGCCTATTTGACAGGTCAGCTAAATACAGAAGTGTATGAACAATGCGTGGCCAAGAG TAACTCTTATGCTAAAGACAAGTGGATATTATATTGCAATAATCCACAATCAGACGTGGCAAATTTGGAT TGGCTATAAGAGAGCAAATCTTCATTAGGTAAGTTTTTTAAACATAAAAAGTATCTAAAAAAATCTTGTC ATGTTTAACGGTGCTGAACTTTGCCAAATGGACAAGAATGCAAAAGGTTAAAATTGCAATCCACCAATTG AAAAGTAGATATAGATACTCAAGGATAAGGGTCTTTGGGCCTGTAAAGCCATTTATATACACTTAGTGCA AAGCCCATGAAACT
Alternatively, load a local file with sequence in Fasta format: Local file name:
Paste second sequence in here: >gi|3036947|dbj|AB012638.1| Nicotiana sylvestris Lhcb1*5 genes for light harvesting chlorophyll a/b-binding protein, complete cds ATCCCGAACCCAAAGTTTGAAATCCTGGCTCCGCCTCTGATCCGTGCCCCCTAAAGGCTTTTAGCATTAA GGGTGTCAAGTGATTTAAATTAATCATTTTCAAGGTATACACATATACATATACAAGATTTCTGCTGAAG TTTACGGGTCCGCCACTGCATACAAGTGGTCCTATTTTACAGGTCAGCTAAATATACAGAAGTGTATGAA CAATGCATGGCCAGGAGTTACTCTTATGCTCTGGCTAAGTTGATATTATATTGCAATAATCCACAATCAG ACGTGGCAAATTTGGATTGGCTATAAGAAGGAAATCTTCATTGGCTTAGATTTTTTAAACGTATAAAGTA TCTACAAAAATCTAGTCATCTTTAACGGTGCAGAACTTTGCCAAATGGAAAAGAATGCAAAAGGTTACAA ATTGTCATCCACCAATGGAAAAGCAGATATAGATATTCAAGGATAAGGTAGTCTTTGGGCCTGTAAATTC ATTTATATACACTTAGTACAAAGCCCATAA
Select database: RegsiteAN DB (human/animals) RegsitePL DB (plants) ooTFD DB (human and animals)
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Last modification date: 27 Nov 2013