NSITE - Recognition of Regulatory motifs

Reference: Solovyev VV, Shahmuradov IA, Salamov AA. (2010) Identification of promoter regions and regulatory sites. Methods Mol Biol. 674, 57-83.

Nsite / Recognition of Regulatory motifs (for RE Sets derived from ooTFD, RegsiteAN DB and RegsitePL DB)

Example

Paste nucleotide sequence here:
>gi|3036947|dbj|AB012638.1| Nicotiana sylvestris Lhcb1*5 genes for light harvesting chlorophyll a/b-binding protein, complete cds ATCCCGAACCCAAAGTTTGAAATCCTGGCTCCGCCTCTGATCCGTGCCCCCTAAAGGCTTTTAGCATTAA GGGTGTCAAGTGATTTAAATTAATCATTTTCAAGGTATACACATATACATATACAAGATTTCTGCTGAAG TTTACGGGTCCGCCACTGCATACAAGTGGTCCTATTTTACAGGTCAGCTAAATATACAGAAGTGTATGAA CAATGCATGGCCAGGAGTTACTCTTATGCTCTGGCTAAGTTGATATTATATTGCAATAATCCACAATCAG ACGTGGCAAATTTGGATTGGCTATAAGAAGGAAATCTTCATTGGCTTAGATTTTTTAAACGTATAAAGTA TCTACAAAAATCTAGTCATCTTTAACGGTGCAGAACTTTGCCAAATGGAAAAGAATGCAAAAGGTTACAA ATTGTCATCCACCAATGGAAAAGCAGATATAGATATTCAAGGATAAGGTAGTCTTTGGGCCTGTAAATTC ATTTATATACACTTAGTACAAAGCCCATAA

Alternatively, load a local file with sequence in Fasta format:
Local file name:

Search for user provided sites (See format):

Database:
RegsiteAN DB (human/animals)
RegsitePL DB (plants)
ooTFD DB (human and animals)