|
SeqMan v.2 - Manipulations with sequences
[Help]
SeqMan - Manipulations with sequences.
This version is obsolete and will be removed soon.
BestPal_empirical - Calculates best palindrome for given rna sequence, and also a set suboptimal palindromes (sorted by energy)
[Help]
[Example]
BestPal_helix - Calculates best palindrome for given rna sequence with restrictions
[Help]
[Example]
BestPal_window - Calculates best palindrome for given rna sequence scanning the sequence with a window (for long sequences)
[Help]
[Example]
SMAP - mapping oligonucleotides to genome
[Help]
[Example]
OLIGO_MAP - Program for fast mapping a big set of oligos to chromosome sequences
[Help]
[Example]
OLIGS - Compute statistics of oligonucleotide occurrences in a set of sequences
[Help]
[Example]
OLIGSR - Compute statistics of oligonucleotide redundant occurrences in a set of sequences
[Help]
[Example]
OLIGS2 - Compute more frequently oligonucleotides in 1 set and less frequently oligonucleotides in 2 set.
[Help]
[Example]
| 
