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Gene finding
Gene finding with similarity
Gene finding in Bacteria
Gene finding in Viruses
Next Generation
Gene search
Gene explorer
Protein location
RNA structure
Protein structure
Multiple alignment
Analysis of expression data
Plant promoter database
Search and map repeats
Extracting known SNPs



RNA structures

Examples of use of programs in scientific publications

FoldRNA - RNA secondary structure prediction through energy minimization [Help] [Example]

BestPal_empirical - Calculates best palindrome for given rna sequence, and also a set suboptimal palindromes (sorted by energy) [Help] [Example]

BestPal_helix - Calculates best palindrome for given rna sequence with restrictions [Help] [Example]

BestPal_window - Calculates best palindrome for given rna sequence scanning the sequence with a window (for long sequences) [Help] [Example]

FindTerm - Finding Terminators in bacterial genomes [Help] [Example]

findMiRNA - programm for search MiRNA [Help] [Example]

TargetMiRna - Search target for MiRNA [Help] [Example]

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