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Gene finding
Gene finding with similarity
Gene finding in Bacteria
Gene finding in Viruses
Next Generation
Gene search
Gene explorer
Promoter
Protein location
RNA structure
Protein structure
3d-explorer
SeqMan
Multiple alignment
Analysis of expression data
Plant promoter database
Search and map repeats
Extracting known SNPs

 

 

Protein Location and Prosite Pattern finding

The programs usage in Scientific publications

Programs presented here address the problem of accurate and fast identification of protein localisation from its sequence, which is essential for many practical applications, including vaccine development, as membrane bound or secreted proteins are more accessible to antibodies than intracellular ones.

ProtComp / Predict the sub-cellular localization for Animal/Fungi proteins [Help] [Example]

ProtComp / Predict the sub-cellular localization for Plant proteins [Help] [Example]

ProtCompB / Localization of bacterial proteins [Help] [Example]

PSITE / Search for Prosite patterns with statistics [Help] [Example]

CTL-epitope-Finder / Program for prediction of putative cytotoxic T lymphocyte (CTL) epitopes [Help] [Example]


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