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Gene finding
Gene finding with similarity
Gene finding in Bacteria
Gene finding in Viruses
Next Generation
Gene search
Gene explorer
Promoter
Protein location
RNA structure
Protein structure
3d-explorer
SeqMan
Multiple alignment
Analysis of expression data
Plant promoter database
Search and map repeats
Extracting known SNPs

 

 

FindTerm

Reference: V. Solovyev, A Salamov (2011) Automatic Annotation of Microbial Genomes and Metagenomic Sequences. In Metagenomics and its Applications in Agriculture, Biomedicine and Environmental Studies (Ed. R.W. Li), Nova Science Publishers, p. 61-78

FindTerm - Finding Terminators in bacterial genomes

Paste nucleotide sequence here:

Alternatively, load a local file with sequence:

Local file name:

All putative terminators (one best signal by default) 
Energy threshold value 

Graphical output of Computed structure is provided in Java viewer or postscript:
Run Java viewer (Java viewer help) Note. To run applet viewer you need to include linux1.softberry.com in the list of your browser (see instruction).
Generate Postscript file

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[Example (run Java viewer)]

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Last modification date: 19 Mar 2015

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