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Gene finding
Gene finding with similarity
Gene finding in Bacteria
Gene finding in Viruses
Next Generation
Gene search
Gene explorer
Promoter
Protein location
RNA structure
Protein structure
3d-explorer
SeqMan
Multiple alignment
Analysis of expression data
Plant promoter database
Search and map repeats
Extracting known SNPs

 

 

FGENESH++ is our newest gene prediction program that works in following steps: (1) performs ab initio gene prediction using FGENESH algorithm; (2) runs predicted amino acid sequences of all potential exons through NR protein sequence database using DBSCAN-P engine; and (3) runs second round of gene prediction with higher scores assigned to exons homologous to known proteins.

The result is fully automated genome annotation of quality similar to manual annotation. The program is extremely fast - whole human genome is annotated in 20-30 hours on a machine like 500 MHz DEC Alpha. Due to computer resources constraints, we cannot make FGENESH++ available through the web site - you have to use FGENESH+ instead.

We can license FGENESH++ for use on any organism except human. Results of FGENESH++ annotation of human genome can be licensed from Biomax Informatics.

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