FGENESH-M - Prediction of multiple (alternative splicing) variants of potential genes in genomic DNA

All software

FGENESH HMM based Gene structure prediction
FGENES Pattern based Human Gene structure
FGENES-M Multiple variants of Gene structure
FGENESH-M Prediction of multiple variants potential genes in genomic DNA
FGENESH_GC (with possible donor GC) HMM based Human Gene structure prediction
BESTORF Finding coding fragment EST/mRNA
FEX Finding potential 5'-, internal and 3'-coding exons
SPL Search for potential splice sites
SPLM Search for non-standard splice sites using weight matrices
RNASPL Search for exon-exon junction positions in cDNA
FSPLICE Find splice sites in genomic DNA

Fgenesh-M

Prediction of multiple (alternative splicing) variants of potential genes in genomic DNA

Paste nucleotide sequence here:

Alternatively, load a local file with sequence in Fasta format:
Local file name:

Select organism specific gene-finding parameters :
Total 353 genome-specific parameters are available for genefinders of FGENESH suite

Number of alternative gene structurest
Hight scoring exon alternatives
Predicted exon alternatives

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Last modification date: 12 Dec 2013

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